Genome Project Solutions

A small sample of publications by Genome Project Solutions' scientists:
(For a more complete list, see the curricula vitae on the homepages of senior personnel)

Rensing, S. A. (68 other authors) and J. L. Boore, 2008 The genome of the moss Physcomitrella patens reveals evolutionary insights into the conquest of land by plants. Science 319: 64-69.

Simison, W. B., and J. L. Boore, 2007 Molluscan Evolutionary Genomics, in Phylogeny and Evolution of the Mollusca (W. Ponder and D. Lindberg, eds.) University of California Press, Berkeley, CA, pp. 447-461.

Tyler, B. M., S. Tripathi, (50 other authors) and J. L. Boore, 2006 Phytophthora genome sequences uncover evolutionary origins and mechanisms of pathogenesis. Science 313: 1261-1266.

Dehal, P., and J. L. Boore, 2006 A phylogenomic gene cluster resource: The Phylogenetically Inferred Groups (PhIGs) database. BMC Bioinformatics 7: 201.

Boore, J. L., 2006 The use of genome-level characters for phylogenetic reconstruction. Trends in Ecology and Evolution 21: 439-446.

Boore, J. L., 2006 Requirements and standards for organelle genome databases. OMICS 10: 119-126.

Dehal, P., and J.L. Boore, 2005  Two rounds of genome duplication in the ancestral vertebrate genome.  PLoS Biology 3(10): e314.

Slade A.J., S.I. Fuerstenberg, D. Loeffler, M.N. Steine and D. Facciotti, 2005 A reverse genetic, nontransgenic approach to wheat crop improvement by TILLING. Nature Biotechnology 23: 75-81.

Wyman, S., R.K. Jansen and J.L. Boore, 2004  Automatic annotation of organellar genomes with DOGMA.  Bioinformatics 20(17): 3252-3255.

Santini, S., J.L. Boore and A. Meyer, 2003  Evolutionary conservation of regulatory elements in vertebrate Hox gene clusters. Genome Research 13: 1111-1122.

Nardi, F., G. Spinsanti, J.L. Boore, A. Carapelli, R. Dallai and F. Frati, 2003  Hexapod origins, monophyletic or paraphyletic?  Science 299: 1887-1889.

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