Genome Project Solutions

 
Whole genome databases:

UCSB Bioserver
DOGS-Database of Genome Sizes
Flybase
Saccharomyces genome
Mouse genome at Jackson Lab
Daphnia genome tools
Gene Ontology Consortium
Ensembl genome browser
Genomes done and in progress (GOLD)
TIGR microbes
Guide to sequenced genomes
dbCat - catalog of databases
Zfin - zebrafish genomics
WormBase
EsPaSy list of genome sites

Organelle genomics :

DOGMA genome annotator
Organelle genomes in GenBank
GOBASE of organelle genomes
Human mtDNA variation
Human mtDNA database
EvoGen organelle genome tools and databases

 
Major public sequencing centers :

DOE Joint Genome Institute
Washington University Genome Center
Baylor Genome Center
Whitehead Institute
The Institute for Genomic Research (TIGR)
Sanger Centre
Genoscope
Riken Genome Sciences Center
Broad Institute

Software and web tools:

Phrap/Phred/Consed
Pipmaker
Felsenstein's favorite phylogeny programs
Mega phylogenetics software
PAUP phylogenetics software
Pfam - protein families
pTARGET - protein subcellular localization
UCSC genome informatics
BioMart project